Running a Simulation

Once you’ve built a model specification that describes the plugins, components, and configuration for the model you want to run, it’s time to run the simulation defined by that model specification using vivarium. There are two ways to run a single simulation.

• Running from the Command Line
• Running a Simulation Interactively
  • Setting up a Simulation
    • With a Model Specification File - The Automatic Way
    • Without a Model Specification File - The Manual Way
      • Components
      • Configurations
      • Setting up
    • Modifying an Existing Simulation
      • Changing configuration
      • Adding additional components
      • Removing components
  • Running the Simulation