Vivarium Public Health Documentation

This library contains several components for modelling diseases and their interventions.

You can install vivarium-public-health from PyPI with pip:

pip install vivarium-public-health

or build it from source by cloning the monorepo and installing this package:

git clone https://github.com/ihmeuw/vivarium-suite.git
cd vivarium-suite
pip install libs/public-health

For broader monorepo development setup, see the monorepo README at https://github.com/ihmeuw/vivarium-suite.

Check out the docs!

Contents:

• Tutorials
  • Disease Models and State Machines
  • Non-standard Risk Exposure and Effect Models
  • Observers
  • Population Structures and Fertility
  • Risk Exposure
  • Risk Effects
  • Treatment
• Concepts
  • Disease
  • Population
  • Results
  • Risk
  • Treatment
• API Reference
  • Utilities
  • EntityString
  • TargetString
  • to_snake_case()
  • to_time_delta()
  • to_years()
  • is_non_zero()
  • Causal Factor Framework
  • Disease Modeling Tools
  • Manager Plugins
  • Population
  • Simulation Observers and Results
  • Risk Modeling Tools
  • Treatment Modeling Tools
• Glossary